<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE root>
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Russian Journal of Oncology</journal-id><journal-title-group><journal-title xml:lang="en">Russian Journal of Oncology</journal-title><trans-title-group xml:lang="ru"><trans-title>Российский онкологический журнал</trans-title></trans-title-group></journal-title-group><issn publication-format="print">1028-9984</issn><issn publication-format="electronic">2412-9119</issn><publisher><publisher-name xml:lang="en">Eco-Vector</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">643393</article-id><article-id pub-id-type="doi">10.17816/onco643393</article-id><article-id pub-id-type="edn">ZMHGKA</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>Original Study Articles</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>Оригинальные исследования</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Genetic determinants of hepatocellular carcinoma: role of PNPLA3, FABP2, FADS1/FADS2 genes in Yakuts</article-title><trans-title-group xml:lang="ru"><trans-title>Генетические детерминанты гепатоцеллюлярной карциномы: роль генов PNPLA3, FABP2, FADS1/FADS2 у якутов</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-7862-1876</contrib-id><contrib-id contrib-id-type="spin">6167-5254</contrib-id><name-alternatives><name xml:lang="en"><surname>Pavlova</surname><given-names>Nadezhda I.</given-names></name><name xml:lang="ru"><surname>Павлова</surname><given-names>Надежда Ивановна</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Cand. Sci. (Biology)</p></bio><bio xml:lang="ru"><p>канд. биол. наук</p></bio><email>solnishko_84@inbox.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0009-0005-5977-5518</contrib-id><contrib-id contrib-id-type="spin">5746-3015</contrib-id><name-alternatives><name xml:lang="en"><surname>Krylov</surname><given-names>Alexey V.</given-names></name><name xml:lang="ru"><surname>Крылов</surname><given-names>Алексей Васильевич</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alexkrulovwork@gmail.com</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0009-0008-5414-4102</contrib-id><contrib-id contrib-id-type="spin">1853-0018</contrib-id><name-alternatives><name xml:lang="en"><surname>Bochurov</surname><given-names>Alexey A.</given-names></name><name xml:lang="ru"><surname>Бочуров</surname><given-names>Алексей Алексеевич</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>binbaher@mail.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-9782-8565</contrib-id><contrib-id contrib-id-type="spin">3750-7480</contrib-id><name-alternatives><name xml:lang="en"><surname>Troev</surname><given-names>Ivan P.</given-names></name><name xml:lang="ru"><surname>Троев</surname><given-names>Иван Петрович</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>ysumed@yandex.ru</email><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-2841-0357</contrib-id><contrib-id contrib-id-type="spin">8254-3787</contrib-id><name-alternatives><name xml:lang="en"><surname>Kurtanov</surname><given-names>Khariton A.</given-names></name><name xml:lang="ru"><surname>Куртанов</surname><given-names>Харитон Алексеевич</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>MD, Cand. Sci. (Medicine)</p></bio><bio xml:lang="ru"><p>канд. мед. наук</p></bio><email>hariton_kurtanov@mail.ru</email><xref ref-type="aff" rid="aff3"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Yakut Science Center of Complex Medical Problems</institution></aff><aff><institution xml:lang="ru">Якутский научный центр комплексных медицинских проблем</institution></aff></aff-alternatives><aff-alternatives id="aff2"><aff><institution xml:lang="en">Ammosov North-Eastern Federal University</institution></aff><aff><institution xml:lang="ru">Северо-Восточный федеральный университет им. М.К. Аммосова</institution></aff></aff-alternatives><aff-alternatives id="aff3"><aff><institution xml:lang="en">Republican Clinical Hospital No. 3</institution></aff><aff><institution xml:lang="ru">Республиканская клиническая больница № 3, Якутск</institution></aff></aff-alternatives><pub-date date-type="preprint" iso-8601-date="2025-09-10" publication-format="electronic"><day>10</day><month>09</month><year>2025</year></pub-date><pub-date date-type="pub" iso-8601-date="2025-10-19" publication-format="electronic"><day>19</day><month>10</month><year>2025</year></pub-date><volume>30</volume><issue>2</issue><issue-title xml:lang="en">Russian Journal of Oncology</issue-title><issue-title xml:lang="ru">Российский онкологический журнал</issue-title><fpage>114</fpage><lpage>123</lpage><history><date date-type="received" iso-8601-date="2024-12-25"><day>25</day><month>12</month><year>2024</year></date><date date-type="accepted" iso-8601-date="2025-08-19"><day>19</day><month>08</month><year>2025</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2025, Eco-Vector</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2025, Эко-Вектор</copyright-statement><copyright-year>2025</copyright-year><copyright-holder xml:lang="en">Eco-Vector</copyright-holder><copyright-holder xml:lang="ru">Эко-Вектор</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/" start_date="2028-10-19"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://creativecommons.org/licenses/by-nc-nd/4.0/</ali:license_ref></license></permissions><self-uri xlink:href="https://rjonco.com/1028-9984/article/view/643393">https://rjonco.com/1028-9984/article/view/643393</self-uri><abstract xml:lang="en"><p><bold>BACKGROUND</bold><bold>:</bold> Hepatocellular carcinoma is an aggressive primary liver cancer. Major risk factors include cirrhosis, hepatitis B and C infections, nonalcoholic fatty liver disease, and type<bold> </bold>2 diabetes mellitus. According to state medical statistics of the Russian Federation for 2021, the highest incidence of malignant neoplasms of the liver and intrahepatic bile ducts was reported in the Republic of Sakha (Yakutia). This may be related to dietary changes that have increased the prevalence of obesity, type<bold> </bold>2 diabetes mellitus, and nonalcoholic fatty liver disease.</p> <p><bold>AIM</bold><bold>:</bold> The work aimed to investigate the variability of the <italic>PNPLA3</italic>, <italic>FABP2</italic>, <italic>FADS1</italic>, and <italic>FADS2</italic> genes, which are involved in lipid metabolism and associated with nonalcoholic fatty liver disease—a risk factor for hepatocellular carcinoma—in the Yakut population.</p> <p><bold>METHODS</bold><bold>:</bold> A total of 498 volunteers participated in the study, of whom 126 were diagnosed with nonalcoholic fatty liver disease with concomitant type 2 diabetes mellitus. Single-nucleotide polymorphisms were determined using polymerase chain reaction followed by restriction fragment length polymorphism analysis.</p> <p><bold>RESULTS</bold><bold>:</bold> In the examined polymorphisms of the <italic>PNPLA3</italic>, <italic>FADS1</italic>, and <italic>FADS2</italic> genes, a predominance of alleles pathogenic with respect to nonalcoholic fatty liver disease was found in both groups. For the rs1799883 polymorphism of the <italic>FABP2</italic> gene, a significant association of the Ala allele with nonalcoholic fatty liver disease and concomitant type<bold><italic> </italic></bold>2 diabetes mellitus was identified (<italic>p</italic> = 0.02). Compared with other populations from the<bold><italic> </italic></bold><italic>1000 Genomes</italic> project database, a high frequency of alleles pathogenic with respect to nonalcoholic fatty liver disease was observed in the Yakut population.</p> <p><bold>CONCLUSION</bold><bold>:</bold> The high prevalence of <italic>PNPLA3</italic>, <italic>FABP2</italic>, <italic>FADS1</italic>, and <italic>FADS2</italic> gene variants associated with increased body mass index and nonalcoholic fatty liver disease is likely related to an adaptive mechanism for fat accumulation in the liver. With the dietary shift from lipid-protein to predominantly carbohydrate intake, these previously advantageous allelic variants now contribute to metabolic disorders that influence the incidence of liver diseases, including hepatocellular carcinoma.</p></abstract><trans-abstract xml:lang="ru"><p><bold>Обоснование.</bold> Гепатоцеллюлярная карцинома представляет собой агрессивный первичный рак печени, факторами развития которого являются цирроз печени, инфекции гепатита B и C, неалкогольная жировая болезнь печени (НАЖБП) и, в частности, сахарный диабет 2 типа (СД2). По данным Государственной медицинской статистики Российской Федерации за 2021 г., самая высокая заболеваемость злокачественными новообразованиями печени и внутрипечёночных жёлчных протоков была отмечена в Республике Саха (Якутия), что, возможно, связано с изменением в привычках питания, которое привело к увеличению числа лиц с ожирением, СД2 и НАЖБП.</p> <p><bold>Цель.</bold> Изучение вариабельности генов <italic>PNPLA3</italic>,<italic> FABP2</italic>,<italic> FADS1</italic> и<italic> FADS2</italic>, участвующих в липидном обмене и ассоциированных с неалкогольной жировой болезнью печени, фактором риска гепатоцеллюлярной карциномы, в якутской популяции.</p> <p><bold>Методы.</bold> Всего в исследовании приняло участие 498 добровольцев, из которых 126 имели диагноз НАЖБП с сопутствующим СД 2 типа. Однонуклеотидные полиморфизмы определяли методом полимеразной цепной реакции с последующим анализом полиморфизма длин рестрикционных фрагментов.</p> <p><bold>Результаты.</bold> В исследованных полиморфизмах генов <italic>PNPLA3</italic>,<italic> FADS1 </italic>и<italic> FADS2 </italic>выявлено преобладание патологических в отношении к НАЖБП аллелей в обеих группах испытуемых. В отношении полиморфизма rs1799883 гена <italic>FABP2 </italic>выявлена значимая (<italic>р</italic>=0,02) связь аллели Ala с НАЖБП с сопутствующим СД2. При сравнении с другими популяциями из базы данных проекта «1000 Genomes» в популяции якутов установлена высокая частота патологических в отношении к НАЖБП аллелей исследованных полиморфизмов.</p> <p><bold>Заключение.</bold> Высокая распространённость вариантов генов<italic> PNPLA3</italic>,<italic> FABP2</italic>,<italic> FADS1 </italic>и<italic> FADS2</italic>,<italic> </italic>ассоциированных с повышенным индексом массы тела и НАЖБП, вероятно, связана с адаптивным механизмом к накоплению жира в печени. С изменением липидно-белковой диеты на преимущественно углеводную благоприятные ранее аллельные варианты этих генов сегодня приводят к метаболическим нарушениям, что влияет на заболеваемость патологиями печени, в том числе к гепатоцеллюлярной карциноме.</p></trans-abstract><kwd-group xml:lang="en"><kwd>PNPLA3</kwd><kwd>FABP2</kwd><kwd>FADS1</kwd><kwd>FADS2</kwd><kwd>polymorphism</kwd><kwd>nonalcoholic fatty liver disease</kwd><kwd>yakuts</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>PNPLA3</kwd><kwd>FABP2</kwd><kwd>FADS1</kwd><kwd>FADS2</kwd><kwd>полиморфизм</kwd><kwd>неалкогольная жировая болезнь печени</kwd><kwd>якуты</kwd></kwd-group><funding-group><award-group><funding-source><institution-wrap><institution xml:lang="en">Ministry of Science and Higher Education of the Russian Federation</institution></institution-wrap><institution-wrap><institution xml:lang="ru">Министерство науки и высшего образования Российской Федерации</institution></institution-wrap></funding-source><award-id>FSRG2022-0009</award-id></award-group></funding-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Sleptsova SS, Sleptsov SS, Semenova VK. Comparative evaluation of various strategies medical care for chronic hepatitis С in the Republic of Sakha (Yakutia). HIV Infection and Immunosuppressive Disorders. 2021;13(1):88–96. doi: 10.22328/2077-9828-2021-13-1-88-96 EDN: XYDYEK</mixed-citation></ref><ref id="B2"><label>2.</label><mixed-citation>Biryukova EV, Rodionova SV. Type 2 Diabetes Mellitus and Non-Alcoholic Fatty Liver Disease — Diseases of the Present. Medical Almanac. 2017;51(6):130–135. (In Russ.)</mixed-citation></ref><ref id="B3"><label>3.</label><mixed-citation>Le MH, Le DM, Baez TC, et al. Global incidence of non-alcoholic fatty liver disease: A systematic review and meta-analysis of 63 studies and 1,201,807 persons. Journal of Hepatology. 2023;79(2):287–295. doi: 10.1016/j.jhep.2023.03.040</mixed-citation></ref><ref id="B4"><label>4.</label><mixed-citation>Wong VW, Ekstedt M, Wong GL, Hagström H. Changing epidemiology, global trends and implications for outcomes of NAFLD. Journal of Hepatology. 2023;79(3):842–852. doi: 10.1016/j.jhep.2023.04.036</mixed-citation></ref><ref id="B5"><label>5.</label><mixed-citation>Ivashkin VT, Drapkina OM, Mayev IV, et al. Prevalence of non-alcoholic fatty liver disease in out-patients of the Russian Federation: DIREG 2 study results. Russian Journal of Gastroenterology, Hepatology, Coloproctology. 2015;25(6):31–41. EDN: VOXFQP</mixed-citation></ref><ref id="B6"><label>6.</label><mixed-citation>Tyaptirgyanova TM. Pecularities of clinical course of chronic hepatopathy in the Far North. Vestnik Severo-Vostochnogo federal'nogo universiteta im. M.K. Ammosova. 2006;3(4):32–37. EDN: JWTJGT</mixed-citation></ref><ref id="B7"><label>7.</label><mixed-citation>Kaprinа AD, Starinsky VV, Shakhzadova AO. Malignant Neoplasms in Russia in 2021 (Incidence and Mortality). Moscow: P.A. Herzen Moscow Research Institute of Oncology, Branch of the National Medical Research Radiological Centre of the Ministry of Health of the Russian Federation; 2022. (In Russ.)</mixed-citation></ref><ref id="B8"><label>8.</label><mixed-citation>Liu C, Liu T, Zhang Q, et al. New-Onset Age of Nonalcoholic Fatty Liver Disease and Cancer Risk. JAMA Netw Open. 2023;6(9):e2335511. doi: 10.1001/jamanetworkopen.2023.35511</mixed-citation></ref><ref id="B9"><label>9.</label><mixed-citation>Vetrano E, Rinaldi L, Mormone A, et al. Non-alcoholic Fatty Liver Disease (NAFLD), Type 2 Diabetes, and Non-viral Hepatocarcinoma: Pathophysiological Mechanisms and New Therapeutic Strategies. Biomedicines. 2023;11(2):468. doi: 10.3390/biomedicines11020468</mixed-citation></ref><ref id="B10"><label>10.</label><mixed-citation>Berezhnaya IV, Zakharova IN, Simakova MA, Sgibneva AI. Polyunsaturated fatty acids: omega-3 and omega-6 and nonalcoholic fatty liver disease. Pediatrics. Consilium Medicum. 2021;(4):335–340. doi: 10.26442/26586630.2021.4.201348 EDN: TJCFBG</mixed-citation></ref><ref id="B11"><label>11.</label><mixed-citation>Nobili V, Alisi A, Liu Z, et al. In a pilot study, reduced fatty acid desaturase 1 function was associated with nonalcoholic fatty liver disease and response to treatment in children. Pediatric research. 2018;5(84):696–703. doi: 10.1038/s41390-018-0132-7</mixed-citation></ref><ref id="B12"><label>12.</label><mixed-citation>Sharma D, Mandal P. NAFLD: genetics and its clinical implications. Clinics and Research in Hepatology and Gastroenterology. 2022;46(9):102003. doi: 10.1016/j.clinre.2022.102003</mixed-citation></ref><ref id="B13"><label>13.</label><mixed-citation>Hancock AM, Witonsky DB, Alkorta-Aranburu G, et al. Adaptations to climate-mediated selective pressures in humans. PLoS Genetic. 2011;7(4):e1001375. doi: 10.1371/journal.pgen.1001375</mixed-citation></ref><ref id="B14"><label>14.</label><mixed-citation>Senftleber N, Jørgensen ME, Jørsboe E, et al. Genetic study of the Arctic CPT1A variant suggests that its effect on fatty acid levels is modulated by traditional Inuit diet. Eur J Hum Genet. 2020;28(11):1592–1601. doi: 10.1038/s41431-020-0674-0</mixed-citation></ref><ref id="B15"><label>15.</label><mixed-citation>Bolognini D, Halgren A, Lou RN, et al. Global diversity, recurrent evolution, and recent selection on amylase structural haplotypes in humans. bioRxiv [Preprint]. 2024 Jun 13:2024.02.07.579378. doi: 10.1101/2024.02.07.579378</mixed-citation></ref><ref id="B16"><label>16.</label><mixed-citation>Fumagalli M, Moltke I, Grarup N, et al. Greenlandic Inuit show genetic signatures of diet and climate adaptation. Science. 2015;349(6254):1343–1347. doi: 10.1126/science.aab2319</mixed-citation></ref><ref id="B17"><label>17.</label><mixed-citation>Panin LE. Homeostasis and problems of circumpolar health (methodological aspects of adaptation). Byulleten' SO RAMN. 2010;30(3):6–11. EDN: MSSFQP</mixed-citation></ref><ref id="B18"><label>18.</label><mixed-citation>Sookoian S, Pirola CJ. Genetic predisposition in nonalcoholic fatty liver disease. Clinical and Molecular Hepatology. 2017;23(1):1–12. doi: 10.3350/cmh.2016.0109</mixed-citation></ref><ref id="B19"><label>19.</label><mixed-citation>Donati B, Motta BM, Pingitore P. The rs2294918 E434K variant modulates patatin-like phospholipase domain-containing 3 expression and liver damage. Hepatology. 2016;63(3):787–798. doi: 10.1002/hep.28370</mixed-citation></ref><ref id="B20"><label>20.</label><mixed-citation>Pavlova NI, Krylov AV, Bochurov AA. High Frequency of Ancestral Haplotype A of Fatty Acid Desaturase Genes in the Yakut Population. Genetic Testing and Molecular Biomarkers. 2024;28(6). doi: 10.1089/gtmb.2024.0085 EDN: KOEPXD</mixed-citation></ref><ref id="B21"><label>21.</label><mixed-citation>Dyakonova AT, Kurtanov KA, Pavlova NI, et al. Polymorphism rs58542926 of the TM6SF2 gene in chronic non-infectious liver diseases in the yakut population. Sovremennye problemy nauki i obrazovaniya. 2019;(6):133. doi: 10.17513/spno.29334 EDN: TCKVGK</mixed-citation></ref><ref id="B22"><label>22.</label><mixed-citation>Kozlitina J, Smagris E, Stender S, et al. Exome-wide association study identifies a TM6SF2 variant that confers susceptibility to nonalcoholic fatty liver disease. Nature genetics. 2014;46(4):352–356. doi: 10.1038/ng.2901</mixed-citation></ref><ref id="B23"><label>23.</label><mixed-citation>Ameur A, Enroth S, Johansson A, et al. Genetic adaptation of fatty-acid metabolism: a human-specific haplotype increasing the biosynthesis of long-chain omega-3 and omega-6 fatty acids. American journal of human genetics. 2012;90(5):809–820. doi: 10.1016/j.ajhg.2012.03.014</mixed-citation></ref><ref id="B24"><label>24.</label><mixed-citation>Borodina SV, Gapparova KM, Zainudiniv ZM, Grigorian ON. Genetic predictors of obesity development. Obesity and metabolism. 2016;13(2):7–13. doi: 10.14341/omet201627-13 EDN: WWJOMZ</mixed-citation></ref><ref id="B25"><label>25.</label><mixed-citation>Dosso B, Waits CMK, Simms KN, et al. Impact of rs174537 on Critically Ill Patients with Acute Lung Injury: A Secondary Analysis of the OMEGA Randomized Clinical Trial. Current developments in nutrition. 2020;10(4):nzaa147. doi: 10.1093/cdn/nzaa147</mixed-citation></ref><ref id="B26"><label>26.</label><mixed-citation>Pavlova NI, Bochurov AA, Alekseev VA, et al. The variability of PNPLA3 gene as a potential marker of cold adaptation in Yakuts. International Journal of Circumpolar Health. 2023;(1):2246647. doi: 10.1080/22423982.2023.2246647</mixed-citation></ref><ref id="B27"><label>27.</label><mixed-citation>Feldstein AE, Werneburg NW, Canbay A, et al. Free fatty acids promote hepatic lipotoxicity by stimulating TNF-α expression via a lysosomal pathway. Hepatology. 2004;40(1):185–194. doi: 10.1002/hep.20283</mixed-citation></ref><ref id="B28"><label>28.</label><mixed-citation>de Luis D, Aller R, Izaola O, et al. Effect of fatty acid-binding protein 2 Ala54Thr genotype on weight loss and cardiovascular risk factors after a high-polyunsaturated fat diet in obese patients. Journal of investigative medicine. 2012;60(8):1194–1198. doi: 10.2310/JIM.0b013e318271fb25</mixed-citation></ref><ref id="B29"><label>29.</label><mixed-citation>Wangab S, Panab Y, Liab J, et al. Endogenous omega-3 long-chain fatty acid biosynthesis from alpha-linolenic acid is affected by substrate levels, gene expression, and product inhibition. RSC Advances. 2017;7:40946–40951. doi: 10.1039/C7RA06728C</mixed-citation></ref><ref id="B30"><label>30.</label><mixed-citation>Arendt BM, Comelli EM, Ma DW, et al. Altered hepatic gene expression in nonalcoholic fatty liver disease is associated with lower hepatic n-3 and n-6 polyunsaturated fatty acids. Hepatology. 2015;61(5):1565–78. doi: 10.1002/hep.27695</mixed-citation></ref><ref id="B31"><label>31.</label><mixed-citation>Nasibulina ES, Borisova AV, Akhmetov II. Study on association of fabp2 gene ala54thr polymorphism with risk of obesity, body fat mass and physical activity. Problems of nutrition. 2013;82(5):23–28. EDN: REXBOZ</mixed-citation></ref></ref-list></back></article>
